Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846222.1_cds_XP_016509559.1_22482
CDS Infomation

[gene=LOC107827017] [db_xref=GeneID:107827017] [protein=GDP-mannose 4,6 dehydratase 1-like] [protein_id=XP_016509559.1] [location=join(77528..78259,78575..78946)] [gbkey=CDS]
Sequence

ATGGCATCCAACAGATCTGAATCTATCCCGGCCGATGCGGCGGATTCGAATGGAGGTCGC
CGGAAAGTAGCTCTGATCACCGGCATTACTGGTCAAGACGGCTCGTACCTTACCGAATTC
CTCCTTGACAAAGGCTACGAAGTCCACGGTCTAATTCGCCGATCCTCCAATTTCAACACG
CAACGCGTGAATCACATCTATATCGATCCACACAACGTTCACAAGGCGCGTATGAAGCTC
CACTACGCTGACGTCACCGACGCGTCATCACTCCGGCGTTGGCTCGATACGATTCTCCCC
GACGAAGTCTACAACCTCGCCGCACAATCTCACGTCGCCGTCTCTTTCGAGATCCCCGAT
TACACCGCCGACGTCGTCGCCACCGGTGCTCTCCGTCTTCTCGAAGCTGTCCGTTCTCAC
ATTTCCGCTACTGGTAGGTCCCACATCCGGTATTACCAAGCCGGTTCATCCGAAATGTTC
GGATCTACTCCTCCGCCCCAGTCCGAAACTACGCCGTTTCATCCTAGATCGCCTTACGCT
GTATCCAAGTGTGCTGCGCATTGGTACACCGTTAATTACCGTGAAGCCTATGGGATCTTT
GCCTGTAATGGTATTCTTTTCAATCATGAATCCCCTAGGCGGGGCGAGAACTTCGTGACC
CGGAAGATCACTCGGGCTGTTGGTCGGATCAAAATTGGGCTACAGAGCAAGCTGTTTCTG
GGTAATTTGCAGGCATCCAGGGACTGGGGTTTTGCCGGGGATTACGTGGAAGCAATGTGG
ATGATGCTGCAGCAAGAGAGGCCGGACGACTACGTGGTGGCGACGGAGGAGTCGCATACG
GTGGAGGAGTTCTTGGAGGTGGCATTCGGATACGTTGGATTGAATTGGAAGGATCATGTG
GTGATTGATAAGAGATACTTTAGGCCTACAGAAGTGGATAATCTAAAGGGAGATTCGAGC
AAGGCGAGAAAGGTTTTGGGTTGGAAGCCCAGAGTCGGGTTCGAGCAATTAGTGAAGATG
ATGGTGGATGAGGATGTTGAGTTGGCCAAAAGAGAGAAAGTTCTTGTTGATGCTGGTTAC
ATGGATGCTCAACAACAGCCTTGA

Peptide Sequence

PEP ID

XP_016509559.1
PEP Infomation

PREDICTED: GDP-mannose 4,6 dehydratase 1-like [Nicotiana tabacum]
Sequence

MASNRSESIPADAADSNGGRRKVALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNT
QRVNHIYIDPHNVHKARMKLHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPD
YTADVVATGALRLLEAVRSHISATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYA
VSKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFL
GNLQASRDWGFAGDYVEAMWMMLQQERPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHV
VIDKRYFRPTEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGY
MDAQQQP

Transcript Sequence

Gene sequence data has not been registered.